Playing with raw dough: 63 sickened with Shiga toxin-producing Escherichia coli infections linked to flour (final update)

The U.S. Centers for Disease Control worked with public health and regulatory officials in many states and the U.S. Food and Drug Administration (FDA) to investigate a multistate outbreak of Shiga toxin-producing Escherichia coli (STEC) infections.

gold-medal-all-purpose5lbSixty-three people infected with the outbreak strains of STEC O121 or STEC O26 were reported from 24 states. A list of the states and the number of cases in each can be found on the Case Count Map page. WGS showed that isolates from ill people were closely related genetically. This close genetic relationship means that people in this outbreak were more likely to share a common source of infection.

Illnesses started on dates ranging from December 21, 2015 to September 5, 2016. Ill people range in age from 1 year to 95, with a median age of 18. Seventy-six percent of ill people were female. Seventeen ill people were hospitalized. One person developed hemolytic uremic syndrome, a type of kidney failure, and no deaths were reported.

Epidemiologic, laboratory, and traceback evidence indicated that flour produced at a General Mills facility in Kansas City, Missouri was the likely source of this outbreak.

In interviews, ill people answered questions about the foods they ate and other exposures in the week before they became ill. Twenty-eight (76%) of 37 people reported that they or someone in their household used flour in the week before they became ill. Nineteen (50%) of 38 people reported eating or tasting raw homemade dough or batter. Twenty-one (57%) of 37 people reported using Gold Medal brand flour. Three ill people, all children, reported eating or playing with raw dough at restaurants.

In an epidemiologic investigation, investigators compared the responses of ill people in this outbreak to those of people of similar age and gender reported to state health departments with other gastrointestinal illnesses. Results from this investigation indicated an association between getting sick with STEC and someone in the household using Gold Medal brand flour.

Federal, state, and local regulatory officials performed traceback investigations using package information collected from ill people’s homes and records collected from restaurants where ill people were exposed to raw dough. These initial investigations indicated that the flour used by ill people or used in the restaurants was produced during the same week in November 2015 at the General Mills facility in Kansas City, Missouri, where Gold Medal brand flour is produced.

whole-wheat_-flour_-jan_-13-768x576On May 31, 2016, General Mills recalled several sizes and varieties of Gold Medal Flour, Gold Medal Wondra Flour, and Signature Kitchens Flour due to possible E. coli contamination. The recalled flours were produced in the Kansas City facility and sold nationwide.

In June 2016, laboratory testing by FDA isolated STEC O121 in open samples of General Mills flour collected from the homes of ill people in Arizona, Colorado, and Oklahoma. WGS showed that the STEC O121 isolates from the flour samples were closely related genetically to the STEC O121 isolates from ill people. The flour collected in Oklahoma was not included in the initial General Mills recall. The other flour samples that were tested came from lots of flour included in the initial recall announced by General Mills. In July 2016, laboratory testing by General Mills and FDA isolated STEC O26 from a sample of General Mills flour. WGS showed that the STEC O26 isolated from the flour sample was closely related genetically to isolates from an ill person in the PulseNet database. The flour tested was not included in the earlier General Mills recalls. As a result of these findings, General Mills expanded its recall on July 1, 2016 and again on July 25, 2016 to include more production dates.

Although the outbreak investigation is over, illnesses are expected to continue for some time. The recalled flour and flour products have long shelf lives and may still be in people’s homes. Consumers who don’t know about the recalls could continue to eat the products and get sick. A list of the recalled products and how to identify them is available on the Advice to Consumers page.

This outbreak is a reminder that is it not safe to taste or eat raw dough or batter, whether made from recalled flour or any other flour. Flour or other ingredients used to make raw dough or batter can be contaminated with STEC and other germs that can make people sick.

Silver Springs Farms recalls beef products due to possible E. coli O157:H7 contamination

Silver Springs Farms, Inc., a Harleysville, Pa. establishment is recalling approximately 740 pounds of ground beef products that may be contaminated with E. coli O157:H7, the U.S. Department of Agriculture’s Food Safety and Inspection Service (FSIS) announced.

silver-springs-e-coliThe ground beef items were produced on August 19, 2016. The following products are subject to recall:

20-lb cases containing 4 packages of 5-lb ground beef 80/20.

The products subject to recall bear establishment number “EST. 4771” inside the USDA mark of inspection. These items were shipped to a distributor in Virginia.

The problem was discovered during a routine verification sampling performed by Silver Springs Farms, Inc. There have been no confirmed reports of adverse reactions due to consumption of these products.

Seek and ye shall find: Beef products recalled due to possible E. coli O103 contamination

Caviness Beef Packers, a Hereford, Texas establishment, is recalling approximately 2,100 pounds of boneless beef trim products that may be contaminated with E. coli O103, the U.S. Department of Agriculture’s Food Safety and Inspection Service (FSIS) announced today.  

caviness-beef-packerssThe 2,100-lb. Combo Bin of “boneless beef trim 84L” products were produced on September 14, 2016 and further processed into ground beef products by another establishment. The recalling establishment has control of all but 320 pounds of ground beef products.

10 lb. chub – 73% Regular Ground Beef products with a “Use By” or “Freeze By” date of October 10, 2016 and bear UPC number 52846-48935. 

2-3 lb. tray pack of – 73% Regular Ground Beef products with a “Sell By” date of September 28, 2016 and bear UPC number 2-01656-00000.

1.5 lb. tray pack of – 73% Regular Ground Beef products with a “Sell By” date of September 28, 2016 and bear UPC number 2-01654-00000.

The products subject to this recall were further processed by a firm other than Caviness Beef Packers, “EST. 675” and may not bear the establishment number “EST. 675”, on products available for direct consumer purchase. These products were shipped to retail locations in Texas.

The problem was discovered when FSIS was notified of a USDA’s Agricultural Marketing Service (AMS) sample that tested positive for E. coli O103. Because the company works with the AMS Commodity Program, AMS did routine microbiological testing. This shipment of beef was never intended for the National School Lunch Program (NLSP) and no sales were made to the NLSP. There have been no confirmed reports of adverse reactions due to consumption of these products.

Many clinical laboratories do not test for non-O157 Shiga toxin-producing E. coli (STEC), such as STEC O103 because it is harder to identify than STEC O157. People can become ill from STECs 2–8 days (average of 3–4 days) after consuming the organism. Most people infected with STEC O103 develop diarrhea (often bloody), and vomiting. Some illnesses last longer and can be more severe. Infection is usually diagnosed by testing of a stool sample. Vigorous rehydration and other supportive care is the usual treatment; antibiotic treatment is generally not recommended.

15 sickened with E. coli O157 in 2015: UK butchers prosecuted over alleged food hygiene offences

In June and July, 2015, 15 people were sickened with E. coli O157 from Robinsons Butchers and Caterers in Billingham, UK.

e-coli-tia-donaldsonIn May 2016, Durham County Council decided it would take no action against the butcher even though cross-contamination was the likely cause.

Yesterday, Stockton Council decided to prosecute Robinsons.

David Huntley of Gazette Live reports Janet Bell and Trevor Robinson, of Robinsons Butchers, are due to appear at Teesside Magistrates’ Court today charged with food safety and hygiene breaches.

A previous report by Public Health England’s outbreak control team stated the likely cause of the outbreak was cross-contamination from raw meat to ready–to-eat food at Robinsons’ Billingham branch and “to a lesser degree” at the Wingate branch.

The authority has now mounted a prosecution against Robinson, 53, and Bell, 55.

Bell and Robinson are accused of breaching food hygiene rules at the Billingham shop by selling cooked ham, pork, beef and ham and egg quiche that was “unfit for human consumption” due to contamination by “pathogenic microorganisms.”

The offences are alleged to have taken place between July 2 and 20 last year.

robinsons-butcherOf the 15 people affected in the E. coli outbreak, 10 needed hospital treatment of which seven went on to develop hemolytic uremic syndrome, a serious condition affecting the kidneys.

All have since recovered.

One victim was Tia Donaldson who suffered kidney failure aged 11.

The youngster’s mum Rachael Donaldson, a volunteer from Billingham, told The Gazette in August last year that Tia was left in a critical condition after a series of strokes stemming from the poisoning.

Rachael said: “She’s had bleeds to her brain. On one occasion she couldn’t feel her left side.

“I was sat right next to her and she kept saying ‘please get my mum, you’re not my mum’.

“She was begging for me to be there.”

Bloody stools are sorta serious: UK mum’s anger after medics ‘ignore’ daughter’s symptoms of E. coli

Cheri Burns of The Daily Record reports a UK mum has told of her anger after her daughter’s symptoms of a potentially deadly strain of E. coli were “ignored” by medics.

350px-escherichia-coliOne-year-old Myla Smith has been diagnosed with E. coli 157 – the same virus bacteria that claimed the life of a child in Dunbartonshire and infected dozens of others during a recent outbreak.

A multi-agency incident management team (IMT) chaired by Health Protection Scotland are carrying out an investigation after 20 people fell ill after eating Dunsyre blue cheese.

Although Myla’s condition is now stable, parent Siobhan Mclelland, from Johnstone in Renfrewshire, said she cannot bare to think about what could have happened after claiming doctors repeatedly missed the signs.

The tot became unwell earlier this month, suffering from bouts of repeated vomiting and diarrhea.

And, when Siobhan, 20, spotted blood in her stools, she knew something was very wrong.

But, despite rushing Myla to the Accident and Emergency department at Paisley’s Royal Alexandra Hospital several times over a seven-day period, Siobhan insists her worries were not taken seriously.

She claimed: “Myla was sick as a dog for days, and when I saw the blood I knew something wasn’t right.

“I took her to hospital on five occasions and they examined her and took blood, but was told it was viral and felt fobbed off.”

Trusting her instincts, Siobhan said it was only after persistence that the problem was treated with more urgency, with samples being sent off for testing at a facility in Edinburgh.

And, just two days later, the parent was stunned to receive a phone call from doctors telling her that the E. coli bug had been detected in results.

Myla now has to return to her local hospital for blood tests and monitoring regularly.

Describing her disappointment at the care her family received, Siobhan told the Record: “I can’t believe what happened – things could’ve been so much worse.

“One doctor we saw didn’t even properly look at Myla, just said she was fine.”

An NHS spokeswoman said: “This patient has been appropriately managed as an outpatient with ongoing monitoring by our pediatric team.

“If her family has any issues they should contact the hospital and we would be happy to address any of their concerns.”

A.I. might prevent the next E. coli outbreak

Tonya Riley of Inverse reports that artificial intelligence is already well on its way to being the future of food service, but what if it could also do things like prevent foodborne illnesses, such as E. coli?

cow-poop2Researchers at University of Edinburgh say they’ve designed  software to do just that. The A.I. compares the genetic signatures of E. coli samples that have caused infection in humans to bacterial samples from humans and animals. The technology will allow researchers to identify deadly strains of E. coli before the threat becomes an outbreak.

“Our findings indicate that the most dangerous E. coli O157 strains may in fact be very rare in the cattle reservoir, which is reassuring,” University of Edinburgh Professor David Gally said in a press release. “The study highlights the potential of machine learning approaches for identifying these strains early.”

E.coli strains can normally live in human and animal guts without complications, but strains like E.coli O157 can cause infection. The strain is much more deadly in humans than in cattle, where the bacteria serves to collect toxins that need disposed. The team predicts that the O157 strain is present in about 10 percent of cattle.

Advancements in cellular engineering will make it easier for researchers to detect bacteria that is harmful to humans, but let’s not forget E. coli isn’t all bad. Air Force researchers have shown that the bacteria may be key to controlling robots through biological means.

Researchers plan on using the software on test samples of other animal-borne toxins, such as salmonella in order to identify strains with the potential to cause human disease.

Raw is risky: Seattle’s Toulouse-Petit closed during food-poisoning investigation

Toulouse is one of my favorite French cities.

horse_meat_09Why is it the name on a restaurant in Seattle?

Laura Fonda of Queen Anne View reports that Toulouse-Petit Kitchen & Lounge (601 Queen Anne Ave N) has been temporarily closed down by King County heath officials as they investigate possible food poisoning at the restaurant.

According to King County Public Health, six out of seven people from the same party ate at the restaurant and became ill with symptoms consistent with a bacterial infection such as Salmonellosis or Shiga toxin-producing E. coli.  The potential food source is still under investigation, but Public Health notes that the party had consumed food items that may increase the risk of foodborne illness, including raw beef and raw egg.

screen-shot-2016-09-22-at-5-27-45-pmPublic Health investigated the restaurant today and found “several problems including room temperature storage, inadequate refrigeration and improper cooling of potentially hazardous foods and cross contamination, which resulted in temporary suspension of the restaurant’s permit.”

20 children sickened: E. coli O26 in Italy, 2013

In summer 2013, an excess of pediatric cases of haemolytic uraemic syndrome (HUS) in a southern region of Italy prompted the investigation of a community-wide outbreak of Shiga toxin 2-producing Escherichia coli (STEC) O26:H11 infections. Case finding was based on testing patients with HUS or bloody diarrhoea for STEC infection by microbiological and serological methods.

bobby-crosier-e-coli_-sep_-15A case–control study was conducted to identify the source of the outbreak. STEC O26 infection was identified in 20 children (median age 17 months) with HUS, two of whom reported severe neurological sequelae. No cases in adults were detected. Molecular typing showed that two distinct STEC O26:H11 strains were involved. The case–control study showed an association between STEC O26 infection and consumption of dairy products from two local plants, but not with specific ready-to-eat products. E.coli O26:H11 strains lacking the stx genes were isolated from bulk milk and curd samples, but their PFGE profiles did not match those of the outbreak isolates.

This outbreak supports the view that infections with Stx2-producing E. coli O26 in children have a high probability of progressing to HUS and represent an emerging public health problem in Europe.

Community-wide outbreak of hemolytic uraemic syndrome associated with Shiga toxin 2-producing Escherichia coli O26:H11 in southern Italy, summer 2013

Eurosurveillance, Volume 21, Issue 38, 22 September 2016

C Germinario, A Caprioli, M Giordano, et al.

http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=22583

Plasmid way: E. coli be swapping genes

Enterohemorrhagic Escherichia coli (EHEC) O157:H7 strain EDL933 harbors multiple prophage-associated open reading frames (ORFs) in its genome which are highly homologous to the chromosomal nanS gene. The latter is part of the nanCMS operon, which is present in most E. coli strains and encodes an esterase which is responsible for the monodeacetylation of 5-N-acetyl-9-O-acetyl neuraminic acid (Neu5,9Ac2). Whereas one prophage-borne ORF (z1466) has been characterized in previous studies, the functions of the other nanS-homologous ORFs are unknown.

bacterial_conjugation_charles_brintonIn the current study, the nanS-homologous ORFs of EDL933 were initially studied in silico. Due to their homology to the chromosomal nanS gene and their location in prophage genomes, we designated them nanS-p and numbered the different nanS-p alleles consecutively from 1 to 10. The two alleles nanS-p2 and nanS-p4 were selected for production of recombinant proteins, their enzymatic activities were investigated, and differences in their temperature optima were found. Furthermore, a function of these enzymes in substrate utilization could be demonstrated using an E. coli C600ΔnanS mutant in a growth medium with Neu5,9Ac2 as the carbon source and supplementation with the different recombinant NanS-p proteins. Moreover, generation of sequential deletions of all nanS-p alleles in strain EDL933 and subsequent growth experiments demonstrated a gene dose effect on the utilization of Neu5,9Ac2. Since Neu5,9Ac2 is an important component of human and animal gut mucus and since the nutrient availability in the large intestine is limited, we hypothesize that the presence of multiple Neu5,9Ac2 esterases provides them a nutrient supply under certain conditions in the large intestine, even if particular prophages are lost.

Importance

In this study, a group of homologous prophage-borne nanS-p alleles and two of the corresponding enzymes of enterohemorrhagic E. coli (EHEC) O157:H7 strain EDL933 that may be important to provide alternative genes for substrate utilization were characterized.

Escherichia coli O157:H7 strain EDL933 harbors multiple functional prophage-associated genes necessary for the utilization of 5-N-acetyl-9-O-acetyl neuraminic acid as a growth substrate

Appl. Environ. Microbiol. October 2016 vol. 82 no. 19 5940-5950, posted online 29 July 2016, doi: 10.1128/AEM.01671-16

Nadja Saile, Anja Voigt, Sarah Kessler, Timo Stressler, Jochen Klumpp, Lutz Fischer and Herbert Schmidt

http://aem.asm.org/content/82/19/5940.abstract?etoc

No cause IDed, but UK children told to get back to class after E. coli outbreak

There were 71 pupils absent at Carlogie Primary on Monday which was a fifth of the school roll of 346 with 46 being kept off as a precaution.

On Tuesday 57 were absent with 37 kept off as a precaution.

A spokesman for Angus Council said: “Members of the community are understandably concerned and have provided tremendous support in trying to minimise spread of infection and identify a possible source.

“The cases and contacts have now been identified and children should now be attending school or nursery unless they are symptomatic or have been formally excluded by the Health Protection Team.”

Part of Tayside Children’s Hospital at Ninewells in Dundee has been set aside for confirmed and suspected cases in the Angus E. coli O157 outbreak.

NHS Tayside confirmed the move as part of what health chiefs described as an “evolving situation” in which a young girl also remains seriously ill in a Glasgow hospital.

The Peter Pan playgroup at the centre of the Angus investigation remains closed.