A tale of two antimicrobial resistance reports

I’ll leave the summary of two antimicrobial resistance reports to my friend and hockey colleague (and he’s a professor/veterinarian) Scott Weese of the Worms & Germs Blog (he’s the semi-bald dude behind me in this 15-year-old pic; I’m the goalie; too many pucks to the head):

 Two reports came out this week, both detailing the scourge of antibiotic resistance.

In Canada, the Canadian Council of Academies released “When antibiotics fail: the expert panel on the potential socio-economic impacts of antimicrobial resistance in Canada.

Not to be outdone, the CDC released Antibiotic Resistance Threats in the United States, 2019.

They’re both comprehensive, with a combined >400 pages explaining that this is a big problem.

I’m not going try to summarize the reports. I’ll just pick out a few interesting tidbits.

From the CCA report (Canada):

According to their modelling, first-line antimicrobials (those most commonly used to treat routine infections) helped save at least 17,000 lives in 2018 while generating $6.1 billion in economic activity in Canada. “This contribution is at risk because the number of effective antimicrobials are running out.”

Antimicrobial resistance was estimated to reduce Canada’s GDP by $2 billion in 2018. That’s only going to get worse unless we get our act together. It’s estimated that by 2050, if resistance rates remain unchanged, the impact will be $13 billion per year. If rates continue to increase, that stretches to $21 billion. Remember, that’s just for Canada, a relatively small country from a population standpoint.

Healthcare costs due to resistance (e.g. drugs, increased length of stay in hospital) accounted for $1.4 billion in 2018.  But remember that people who die from resistant infections can actually cost less. If I get a serious resistant infection and die quickly, my healthcare costs are pretty low since I didn’t get prolonged care. All that to say that dollar costs alone don’t capture all the human aspects. Regardless, this cost will likely increase to $20-40 billion per year by 2050.

In terms of human health, resistant infections were estimated to contribute to 14,000 deaths in Canada in 2018, with 5,400 of those directly attributable to the resistant infection (i.e. those deaths would not have occurred if the bug was susceptible to first line drugs). That makes resistance a leading killer, and it’s only going to get worse.

I’ll stop there. The document has a lot of good information and it’s worth reading if you’re interested in the topic.  They also provided a handy 2-page “infographic” summary if you can’t quite stomach the complete 268-page report (also see image below).

From the CDC report (US):

The document’s dedication says a lot. “This report is dedicated to the 48,700 families who lose a loved one each year to antibiotic resistance or Clostridioides difficile, and the countless healthcare providers, public health experts, innovators, and others who are fighting back with everything they have.”

The forward has some great messages too:

To  stop antibiotic resistance, our nation must:

Stop referring to a coming post-antibiotic era—it’s already here. You and I are living in a time when some miracle drugs no longer perform miracles and families are being ripped apart by a microscopic enemy. The time for action is now and we can be part of the solution.

Stop playing the blame game. Each person, industry, and country can affect the development of antibiotic resistance. We each have a role to play and should be held accountable to make meaningful progress against this threat.

Stop relying only on new antibiotics that are slow getting to market and that, sadly, these germs will one day render ineffective. We need to adopt aggressive strategies that keep the germs away and infections from occurring in the first place.

Stop believing that antibiotic resistance is a problem “over there” in someone else’s hospital, state, or country—and not in our own backyard. Antibiotic resistance has been found in every U.S. state and in every country across the globe. There is no safe place from antibiotic resistance, but everyone can take action against it. Take action where you can, from handwashing to improving antibiotic use.

Some might say it’s alarmist. However, I don’t think it’s alarmist when someone really should be raising the alarm. We need to talk about it more, not less. We need to get people (including the general public, healthcare workers, farmers, veterinarians, policymakers) on board, to realize it’s a big issue that needs to be addressed now. “Short term pain for long-term gain” certainly applies here. We can keep delaying and the numbers will keep going up, or we can invest in solutions.

The numbers are scary but specific numbers don’t really matter in many ways. “Lots” is all we should have to know to get motivated. However, decision-makers like numbers, so these numbers hopefully will be useful to show the impact and potential benefits of investing in this problem, and motivate them to put money into antimicrobial stewardship. Saving lives should be enough, but that often doesn’t cut it. Antibiotic resistance doesn’t have a good marketing campaign. Everyone knows why people were wearing pink last month and why there are some pretty dodgy moustaches this month. Those are important issues, for sure. However, considering the overall impact, antibiotic stewardship needs to get more people behind it if we’re going to effect change.

Funky duck: Processor goes full tilt on transparency

The kids in my lab had me buy a video camera in 1999 so we could film stuff and put it on the Intertubes long before youtube existed (and film my 2000 Ivan Parkin lecture at IAFP when I got turned away at the U.S. border).

Twenty years later, Leesburg, Ind.-based Maple Leaf Farms is offering a behind-the-scenes look at its duck farms with its new #MLFarmToFork campaign that focuses on transparency and the company’s commitment to operating responsibly.

According to Rita Jane Gabbett of Meating Place, Maple Leaf Farms will highlight its farm-to-fork process on social media through behind-the-scenes videos, farmer interviews and more.

“We want consumers to know the story behind our duck and our desire for continuous improvement,” explained Maple Leaf Farms Duck Marketing Manager Olivia Tucker. “We’re proud of our animal husbandry practices, our facilities and our people, and we want to showcase how vertical integration allows Maple Leaf Farms to produce the highest quality duck on the market.”

To explain vertical integration and how it benefits the entire supply chain, Maple Leaf Farms has created an animated video that outlines the production process and how products get to consumers’ tables. You can view the video at www.tinyurl.com/MLFarmtoFork.

Salmonella, E. coli O157, Listeria, Campy: 1.9 million foodborne illnesses in US per year

In an ongoing effort to understand sources of foodborne illness in the United States, the Interagency Food Safety Analytics Collaboration (IFSAC) collects and analyzes outbreak data to produce an annual report with estimates of foods responsible for foodborne illnesses caused by pathogens. The report estimates the degree to which four pathogens – Salmonella, E. coli O157, Listeria monocytogenes, and Campylobacter – and specific foods and food categories are responsible for foodborne illnesses.

The Centers for Disease Control and Prevention (CDC) estimates that, together, these four pathogens cause 1.9 million foodborne illnesses in the United States each year. The newest report (PDF), entitled “Foodborne illness source attribution estimates for 2017 for Salmonella, Escherichia coli O157, Listeria monocytogenes, and Campylobacter using multi-year outbreak surveillance data, United States,” can be found on the IFSAC website.

The updated estimates, combined with other data, may help shape agency priorities and inform the creation of targeted interventions that can help to reduce foodborne illnesses caused by these pathogens. As more data become available and methods evolve, attribution estimates may improve. These estimates are intended to inform and engage stakeholders and to improve federal agencies’ abilities to assess whether prevention measures are working.

Foodborne illness source attribution estimates for 2017 for salmonella, Escherichia coli O157, listeria monocytogenes, and campylobacter using multi-year outbreak surveillance data, United States, Sept.2019

CDC, FDA, USDA-FSIS

https://www.cdc.gov/foodsafety/ifsac/pdf/P19-2017-report-TriAgency-508.pdf?deliveryName=DM10264

Face the face: USDA to pay Tyson Foods $1 million settlement

Tyson Foods has, according to KATV, negotiated a settlement with the U.S. Department of Agriculture (USDA) for $1 million.

The settlement is linked to a lawsuit in which the meat processor said a federal meat inspector lied about inspecting hogs at its Storm Lake, Iowa, plant, forcing the company to destroy 8,000 carcasses and resulting in $2.4 million in losses and expenses.

Tyson Foods filed suit against the government agency in May after an inspector signed inspection cards for 4,622 hogs at the Storm Lake facility. The antemortem inspections were never actually conducted by the agency in person as the report stated.

The meat giant was able to show the courts the inspector never left her car but signed the cards without seeing the hogs.

Tyson Foods said it incurred losses of $2.48 million from the false reports. By the time it learned of the alleged actions, the negligently inspected hogs had been intermingled into a larger group of some 8,000 hog carcasses and therefore could no longer be positively identified and the entire group had to be destroyed.

“This was an unfortunate situation and we appreciate the USDA for working with us to address our losses. We take our commitment to food safety very seriously and look forward to a continued partnership with the USDA,” Tyson Foods spokesman Worth Sparkman told Talk Business & Politics in an email statement.

Size does not matter: 21 sick from Salmonella linked to pet turtles

I want a new drug, or approach or message, rather than CDC sending out yet another warning about yet another Salmonella outbreak from kids kissing their pet turtles.

(And I can’t believe I’m quoting Huey Lewis and the News, one of my 1982 university room mates’ favorite bands, along with Hall and Oates).

The U.S. Centers for Disease Control reports:

21 people infected with the outbreak strain of Salmonella Oranienburg have been reported from 13 states.

7 hospitalizations have been reported. No deaths have been reported.

Epidemiologic and traceback evidence indicate that contact with pet turtles is the likely source of this outbreak.

In interviews, 12 (71%) of 17 ill people reported contact with a turtle.

This investigation is ongoing and CDC will provide updates when more information is available.

Turtles can carry Salmonella germs in their droppings while appearing healthy and clean. These germs can easily spread to their bodies, tank water, and habitats. People can get sick after they touch a turtle or anything in their habitats.

People who own or come in contact with turtles should take steps to stay healthy around their pet:

Wash your hands.

Always wash hands thoroughly with soap and water right after touching, feeding, or caring for a turtle or cleaning its habitat.

Adults should supervise handwashing for young children.

Play safely.

Don’t kiss or snuggle turtles, because this can spread Salmonella germs to your face and mouth and make you sick.

Don’t let turtles roam freely in areas where food is prepared or stored, such as kitchens.

Clean habitats, toys, and pet supplies outside the house when possible.

Avoid cleaning these items in the kitchen or any other location where food is prepared, served, or stored.

Pick the right pet for your family.

CDC and public health officials in several states are investigating a multistate outbreak of human Salmonella Oranienburg infections linked to contact with pet turtles.

Public health investigators are using the PulseNet system to identify illnesses that may be part of this outbreak. PulseNet is the national subtyping network of public health and food regulatory agency laboratories coordinated by CDC. DNA fingerprinting is performed on Salmonella bacteria isolated from ill people by using a standardized laboratory and data analysis method called whole genome sequencing (WGS). CDC PulseNet manages a national database of these sequences that are used to identify possible outbreaks. WGS gives investigators detailed information about the bacteria causing illness. In this investigation, WGS showed that bacteria isolated from ill people were closely related genetically. This means that people in this outbreak are more likely to share a common source of infection.

Ill people reported contact with red-eared sliders and other turtles that were larger than four inches in length. Previous Salmonella outbreaks have been linked to turtles with a shell length less than four inches. Due to the amount of Salmonella illnesses related to these small turtles, the U.S. Food and Drug Administration banned the sale and distributionexternal icon of turtles with shells less than four inches long as pets.

Regardless of where turtles are purchased or their size, turtles can carry Salmonella germs that can make people sick. Pet owners should always follow steps to stay healthy around their pet.

This investigation is ongoing, and CDC will provide updates when more information becomes available.

Hydration hype: Fancy bottled drinking water is nonsense, just drink tap

My friend Tim Caulfield, a Canada Research Chair in Health Law and Policy at the University of Alberta, author of “Is Gwyneth Paltrow Wrong About Everything?: How the Famous Sell Us Elixirs of Health, Beauty & Happiness” (Beacon, 2015) and host of “A User’s Guide to Cheating Death” on Netflix (that’s a long bio) writes for NBC News, humans need water but the marketing of water as a detoxifying, energizing, health-enhancing, miracle beverage has become a lucrative business. Over the past few years the booming wellness industry (aka Big Wellness) has coopted this most basic of biological needs to sell products and promises of miraculous improved health. But is there any evidence to support the hydration hype?

Before I dump on the water business, let’s give a nod to the positives. There is growing recognition that sugary beverages are not a good choice, nutrition wise. Evidence suggests that consumption of sugary beverages, especially soft drinks, is associated with a range of health issues, including obesity and heart disease. As a result, there is a broad consensus among nutrition and public health experts about the value of limiting the consumption of these calorie-dense and relatively nutrition-free beverages.

So, in this context, the shift to water is a very good thing. But that doesn’t mean we have to buy what the “premium” water market is selling.

But before we get to the fancy packaging, we need to talk about volume. Do you actually need to drink eight glasses of water a day? In a word: Nope.

This strange and incredibly durable myth seems to have emerged from a misinterpretation of a 1945 US Food and Nutrition Board recommendation. That document suggested a “suitable allowance of water for adults is 2.5 litres daily” (i.e., roughly eight glasses a day). But what is almost always overlooked is that the recommendation — which was not based on a robust body of research — also noted “[m]ost of this quantity is in prepared foods.” In other words, you already get the bulk of your needed water from the food you eat.

In reality, there is no magical amount of water. We do need to stay appropriately hydrated, of course. And as our climate and activities change, so does the amount of water we lose through sweating etc. But our bodies are good at telling us how much and when we should drink. (Thanks, evolution.) And all liquids — coffee, tea, that weird fluid inside hotdogs — count toward your daily consumption of water. My body can’t tell if an H20 molecule came from a fresh-water spring on the side of a remote Himalayan mountain or from a cup of gas station java (which isn’t, despite conventional wisdom to the contrary, dehydrating).

But even if water is found in a lot of foods and beverages, pure bottled water is still better for us, right? Wrong again.

Yes, drinking plain water is almost always a better choice than some other, sugar-infused, beverage. But the water you drink doesn’t need to come out of a plastic, glass, or 24-karat gold (yes, that is a thing) bottle.

The twisted logic behind wellness gadgets like Fitbit isn’t making us healthier

Studies have shown that some people believe bottled water is healthier than tap water. That perception is wrong. In fact, tap water in the U.S. and Canada is almost always the best, cheapest and most environmentally friendly choice. Bottled water can be essential during emergencies that disrupt the supply of clean water. And there have been scary examples of contaminated public water — the Flint, Michigan water crisis being only one recent example.

We also need to be vigilant to ensure our public water supply remains clean. But in most places in the United States and Canada, tap water is tightly regulated and safe. Not only that, but tap water can have less contaminants than bottled waterA study from Canada, for example, found that 70 percent of the tested bottled water brands contained high levels of bacteria and generally had more bacteria than tap water. A 2019 Consumer Report investigation concluded “that in some cases bottled water on store shelves contains more potentially harmful arsenic than tap water.”

But bottled water tastes better, you say! Actually, blind taste tests have consistently found that to be untrue too. To cite just one example, only one-third of the participants in a Boston University study, were able to correctly identify tap water. One third thought it was bottled water and one third couldn’t tell the difference.

But bottled water tastes better, you say! Actually, blind taste tests have consistently found that to be untrue too.

And now we get to what is probably the biggest scam. Wellness wonks have been pushing absurd diets, supplements and potions for decades. Now that same thinking has come to water, with alkaline, hydrogen, gluten and GMO-free water brands hitting the supermarket and health food store shelves near you.

Nope, nope and — sigh — nope.

Alkaline water is part of the larger multimillion-dollar alkaline diet fad embraced by celebrities like New England Patriots quarterback Tom Brady. Proponents claim that humans can become too acidic and, as such, we need to consume foods and beverages that will lower the pH of our bodies. By doing so, we will improve our health and reduce the incidence of disease and cancer, the theory goes.

Problem one: There is little evidence to support the entire premise that adjusting the pH of your food will have an impact on our health. And the studies that have explored the claim have found little benefit to this dietary approach, outside of the diet’s push to eat more fruits and vegetables. (Eating more fruits and vegetables is of course good for you hand can help you stay healthier for longer.)

Problem two: You can’t change the pH of your body through food and beverages. So the entire premise is scientifically absurd. Your body tightly regulated the pH of your blood. It doesn’t need the help of overpriced bottled water.

 

The Crown:: Queen Elizabeth’s staff follows serious (not so much) food poisoning protocol

Queen Elizabeth has a crafty way to avoid getting poisoned at the dinner table. A new documentary called Secrets of the Royal Kitchen explores the ins and outs of Buckingham Palace’s kitchens, including the lengths royal staffers go to keep Elizabeth safe. Here’s a quick look at all the interesting elements that go into a state banquet with the Queen.

During state banquets, Her Majesty’s staff are required to follow a serious protocol to keep her safe – and the lengths they go for her safety might surprise you.

A personal chef at the palace prepares the dishes for all of the guests. According to the New York Post, Elizabeth’s staff members then chose a random plate for her in an effort to prevent someone from poisoning her food.

The only way someone would be able to poison Queen Elizabeth is if they contaminated all of the dishes. This tactic has paid off so far, though we couldn’t imagine why someone would want to poison the Queen.

“After everything is plated up, a page chooses at random one of the plates to be served to her majesty,” Emily Andrews, a correspondent for the royals, shared. “So if anyone did want to poison the monarch they’d have to poison the whole lot.”

The documentary also revealed that banquet guests are required to follow some strict rules while dining with  Elizabeth Queen.

This includes finishing their plates before Her Majesty is done eating. This is an old tradition that used to be more of an issue in the past as guests would race to finish their food. It is unclear if the palace requires visitors to follow this protocol or if they have gotten more flexible in recent years.

There are, of course, plenty of other traditions guests are required to follow whenever they are eating with the Queen.

For starters, nobody sits down until Elizabeth has been seated. You also cannot start eating until she has taken her first bite.

Elizabeth also has a personal menu that has been crafted to her liking. She schedules her meals three days in advance to give the palace chef plenty of time to gather ingredients.

When picking her dining options, Elizabeth crosses out dishes she doesn’t like. She also crosses out entire pages whenever she has a royal event that evening and will not be dining in the palace.

Sounds like me being in psyche jail.

And not a mention of microbiology.

Dumbasses.

Texas meat company execs plead guilty to selling $1 million worth of uninspected, adulterated beef to federal prisons

Prisons are not pleasant places, neither are psych wards.

They’re really just boring, and involve dealing with controlling types – police, prison guards, parole officers, customs officials, psych-types – who expend major effort in defending the small piece of turf they control.

In prison, we’d have road apples at every meal – huge plums or something the size of horse testicles (road apples refers to the frozen version of horse turds, popular for pond hockey).

Jessica Fu of New Food Economy reports that two executives of a now-defunct meatpacking company pleaded guilty to selling more than $1 million worth of adulterated and uninspected beef to the federal prison system, the Department of Justice announced this week.

Jeffrey Neal Smith and Derrick Martinez, president and operations manager of West Texas Provisions, respectively, admitted to contaminating and mislabeling approximately 775,000 pounds of meat that were then distributed to 32 prisons in 18 states. Specifically, Smith and Martinez sold products that they falsely claimed had been inspected by the Department of Agriculture’s (USDA) Food Safety and Inspection Service (FSIS) between October 2016 and August 2017. They also cut ground beef with whole cow hearts, thereby violating USDA food standards.

Though this is one individual case, it falls within a broad spectrum of issues relating to food safety in the prison system.

Smith and Martinez apparently went to great and, sometimes, bizarre lengths to obscure their scheme. Federal law requires all slaughterhouses to undergo FSIS inspection. To that end, after meatpacking facilities report their hours of operation to the agency, they are prohibited from working outside those hours.

According to former employees, Smith and Martinez ordered workers to come in on nights and weekends and process meat without inspectors present. To avoid arousing suspicion, workers were instructed to park off-site and work with the lights off, according to court documents. They were also discouraged from leaving the building to take meal breaks, in order to keep activity around the facility to a minimum. Additionally, Smith and Martinez admitted to hiding uninspected meat in freezers, and distracting inspectors from noticing said meat.

Though this is one individual case, it falls within a broad spectrum of issues relating to food safety in the prison system. In 2014, another Texas meat processor paid nearly $392,000 as part of a settlement with the USDA for mislabeling beef meant for pet food, which was then sold to the Bureau of Prisons. In Arizona, former inmates say they were served chicken from boxes labeled “not for human consumption.” Last year, The New Food Economy reported on the hidden public health crisis in America’s prisons—where incarcerated people were more than six times as likely to get a foodborne illness than the general population.

There are often economic incentives for food service providers to turn a blind eye to quality, such as the right to pocket any money leftover after fulfilling a contract. Infamously, an Alabama prison sheriff bought a beach house partially using “excess” funds meant to feed inmates. Smith and Martinez were also likely financially motivated to shirk federal beef standards.

Attorneys for the executives did not respond to requests for comment. Both defendants are scheduled to be sentenced on February 13, 2020.

Owner of food company responsible for Spain’s worst ever listeriosis outbreak arrested for manslaughter

Eva Saiz of El Pais reports the owners of the food company responsible for the worst-ever listeriosis outbreak in Spain were arrested on Wednesday for manslaughter.

Since August, the outbreak has killed three people, caused seven miscarriages, and infected more than 200 people. The source of the bacterial infection was traced to a Seville-based company called Magrudis, which sold a contaminated pork loin product called carne mechada under the brand name La Mechá. Three more products produced by the company also tested positive for Listeria monocytogenes.

The owners of Magrudis, José Antonio Marín Pince and his two children Sandro and Mario, have been accused, to different degrees, of involuntary manslaughter, crimes against health and causing injury to a fetus.

According to investigators, the three men knew in February that some of their products had been contaminated but did nothing to eliminate the bacteria from their facilities. Instead they continued producing and distributing their products.

“When the crisis broke, we reminded the business by email that one of their samples had been contaminated much earlier. Given that they did nothing, we passed on this information to the courts,” José Antonio Borrás, the owner of the Microal Group laboratory, told EL PAÍS.

The laboratory handed a report to the court in early September, and according to sources close to the investigation, the contents prompted Judge Pilar Ordóñez, who is overseeing the case, to take action on Tuesday.

Neither laboratories nor companies are legally obliged to warn the authorities if a product is found to test positive, but a company does have a duty to adopt measures to correct the problem. Investigators want to find out why the owners of Magrudis did not do this, and why, more importantly they hid the positive test results from health inspectors who visited the factory after the alert was raised. In public appearances, both Marín and his son Sandro claimed that the company had successfully passed all sanitary controls.

Traces of listeria were found in tests carried out on the Magrudis production line, including the oven carts used to transport the meat during the preparation process, and the larding needles used to inject the pork with fat before cooking. The crisis was complicated by the fact that the company’s products had been sold on to another firm and prepared for sale as an own-brand product in a supermarket chain without the proper labelling.

FDA Frank: Digital prompts key to changing food safety behavior

Tom Karst of The Packer writes that teasing the details of a new era of smarter food safety, Food and Drug Administration deputy commissioner for food policy and response Frank Yiannas spoke Sept. 18 at the United Fresh Washington Conference.

Before coming to FDA last December, Yiannas was vice president of food safety at Walmart from 2008 to 2018.

And Disney in Orlando before that.

Yiannas said the FDA’s work on produce safety has been front and central to his work since he joined the agency.

He praised the industry for its contribution to food safety and said the public-private partnership on food safety efforts must strengthen even more in what he called a new era of smarter food safety that is set to begin in 2020.

“I was asked by the Commissioner to continue to lead our efforts on modernization,” Yiannas said. “We’ve come a long way since 2011, but there’s still work to be done.”

Tech-enabled traceability and tech-enabled outbreak response will be one area of focus for the new era of smarter food safety, Yiannas said.

While produce has an impressive safety record overall, he said there are weak points in the supply chain.

“What I have learned over the years, and especially from my vantage point with the world’s largest company, is that I do believe the food system’s Achilles heel is traceability and transparency,” he said.

He noted that in both the spinach-related foodborne illness outbreak in 2006 and the romaine-related outbreak in 2018, traceability was an issue.

“It seems eerily similar almost a decade later,” he said. “And we still are having to do these overly broad consumer advisories.”

Distributed ledger or blockchain technology can be part of the solution, he said, but that isn’t the focus.

“It is not about the technology— it is about solving some of our many public health challenges,” he said.

Helping efforts to create a culture of food safety among growers, food marketers, and consumers is another element of the new era plan, he said.

“What I’ve learned over the years, is that it’s impossible to make progress without changing and influencing behavior,” he said, noting the importance of “digital prompts” to encourage right behavior.

I agree.